PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156796.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 438aa    MW: 47801.9 Da    PI: 6.8542
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86.2e-063253631154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_022156796.1 325 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 363
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MAEEFPSSGN WWDASRSRYD AGISPSSSSV TTFPWPPPDI ADVKPRSSIH DSDSDSASAD  60
PNLHFMGLGL ASPPIDWNHP LLRGGEKAAE SSFRSMLQQE NMQETGQQQQ QIQWMRSEKL  120
FSGETPASEF KAINRGFSLD HHQAQPQQFS PPQYSSGDSA VTSFPMDTAA NLYGSSATLL  180
QGLLGGGDQQ QTSPPAPALN FPYSAHFAMN SGELMPPWSA SKVPPFLRNS PPKAAAPAPP  240
HSSHLHFSNN TPFWNASDIK DVRPSFFPSY NPAPAYPDKS KQNISEVRDS GTVGKKSGND  300
HNQQTGAAAK RPRNETPSPL PAFKVRKEKM GDRITALQQL VSPFGKTDTA SVLSEAIEYI  360
KFLHEQVSVL STPYLKSGTA VQQQHQQQQS SEKSKEGEGG KQDLRSRGLC LVPVSSTFPV  420
THETTVDFWT PTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.16e-70bHLH family protein