PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156836.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 241aa    MW: 28121.5 Da    PI: 9.6859
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.46.5e-35191102102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF +++F+kg ke+l++
  XP_022156836.1  19 FLVKTYMLVEDPATDDVISWNDDGTAFVVWQPPEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSR---------WEFYNDKFRKGAKEQLCE 104
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_022156836.1 105 IRRRKA 110
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MREAVAATAT SRKSTPPPFL VKTYMLVEDP ATDDVISWND DGTAFVVWQP PEFARDLLPT  60
LFKHSNFSSF VRQLNTYGFR KVATSRWEFY NDKFRKGAKE QLCEIRRRKA WNNRPRRQNT  120
STIKATHQDR HDDDQRLSSS SSSSDQYATL VDENTRLKKE NGVLSSELTN MKKKCRELLD  180
LVAKYKYAIN DEDDEHERDQ TIMKPNLKLF GVKLEVGDEM MMREXKRKRS VDQNTPILLS  240
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.12e-67HSF family protein