PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156850.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 241aa MW: 27424.2 Da PI: 8.1386

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	1.9e-11	71	121	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ + ++ Lr llP+ +K s + ++v+YI+++q XP_022156850.1 71 IIHRDVERQRRQEMSTLYAALRALLPPdY---LRGKRSICDHMHETVKYIQHMQ 121 5699*********************66...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEFNIQSPLS FEVVEELLPL PSLSCVDIAV PQLPAAHNLS DIILSQSPKY GRRRKEPPVF 60 AGDENNKKKK IIHRDVERQR RQEMSTLYAA LRALLPPDYL RGKRSICDHM HETVKYIQHM 120 QTKIQELSQK RDELKKHAKQ NSDHETTETP STTRKDTIVV RKKHGGVQVV LDTATTRRRP 180 VSSILEALIA EGLQIASCIS TKINDRFLHT IESEAADDSN PSVDVSELHH KLTNLENFPL 240 D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	52	70	RRRKEPPVFAGDENNKKKK
2	53	71	RRRKEPPVFAGDENNKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	4e-35	bHLH family protein