PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156904.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 241aa MW: 27340.4 Da PI: 8.4957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	71	122	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ + +++Lr+llP ++K s + ++v+YI+++q XP_022156904.1 71 KIIHRDVERQRRQEMSTLYATLRSLLPFeY---LKGKRSICDHMHETVKYIRHMQ 122 56699*********************77...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MNCRIDSPFS FDVVDDLFPL PPLSCMDIPL PQLPSVVSRP AAALKPKNCR RRKPPPVSSD 60 HSNPNEHKKR KIIHRDVERQ RRQEMSTLYA TLRSLLPFEY LKGKRSICDH MHETVKYIRH 120 MQRQVQELSD KREELKKLSG EDSDAGTAET LSASKRDSVA VRPRGEGVQV VLDTGTQHRL 180 PVSNILEALL AVGLEIVGCI STKINDRFLH TIEAVPDGSL RNIDVSELHH KLTNLEYFPL 240 D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	71	RRRKPPPVSSDHSNPNEHKKRK
2	51	72	RRRKPPPVSSDHSNPNEHKKRK
3	69	82	KRKIIHRDVERQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	1e-36	bHLH family protein