PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157014.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 232aa MW: 26258.1 Da PI: 5.3641

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.7e-18	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l ++v+++G+g+W+++a g++Rt+k+c++rw++yl XP_022157014.1 5 KGPWTPEEDSVLFNYVTLHGNGHWNSVACSTGLRRTGKSCRLRWLNYL 52 79********************************************97 PP
2	Myb_DNA-binding	46.8	6.6e-15	58	101	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_022157014.1 58 RGNITLQEQLLILELHSLWGNR-WSKIAQFLP-GRTDNEIKNYWRT 101 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MEVKKGPWTP EEDSVLFNYV TLHGNGHWNS VACSTGLRRT GKSCRLRWLN YLRPNVRRGN 60 ITLQEQLLIL ELHSLWGNRW SKIAQFLPGR TDNEIKNYWR TRVQKQAKQL NCEVNSQRFR 120 DAMRLVWIPR LVERITAASG ESPPLMAESS TSASTTNTES TWANPNNNNN DILTDMSATS 180 SDSSNVTAGE VCGSGWEDGF GAGWWDGDGV DSSLESLWTE ENISFLQQQL FD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	1e-68	MYB family protein