PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157453.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 227aa    MW: 25670.5 Da    PI: 6.8674
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS175.24.9e-541226139374
            GRAS 139 ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle.leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk 232
                     pp l+iT+++s ++++  el  t+e+L++fA+ l + fe +vl +++l++ + +  L+v+++Ea+aVnl +   ++++ s++l+     vL++vk
  XP_022157453.1   1 PPFLKITAFASTSTHDDFELGFTQENLKNFAHDLSIGFELEVLNMESLNSGSwPLPLNVSENEAIAVNLPV--GSFFNYSLPLPM----VLRFVK 89 
                     79***********99****************************777777664266799************9..556666888888....****** PP

            GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327
                     +l Pk+vv v++ +++ +++F  r+++ l+ ys l++s++a  + + +++ k+Er ll++ i+++v+ ++ +    +e+l  Wr+ + ++GF+p+
  XP_022157453.1  90 HLCPKIVVSVDRGCNRMDAPFPFRVINGLQSYSGLLESMDAV-SVNLDTQLKIERYLLQPGIEKLVMSRHGS----NERLPPWRSLFLSSGFSPL 179
                     ***************************************876.56779*******************99888....9****************** PP

            GRAS 328 plsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++s+++++qa++ll++++++g+++e+++ +lvl+W++++Lvs+SaWr
  XP_022157453.1 180 TFSNFTESQADCLLHRTPVQGFHIEKRHSTLVLCWQRKELVSISAWR 226
                     **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
PPFLKITAFA STSTHDDFEL GFTQENLKNF AHDLSIGFEL EVLNMESLNS GSWPLPLNVS  60
ENEAIAVNLP VGSFFNYSLP LPMVLRFVKH LCPKIVVSVD RGCNRMDAPF PFRVINGLQS  120
YSGLLESMDA VSVNLDTQLK IERYLLQPGI EKLVMSRHGS NERLPPWRSL FLSSGFSPLT  180
FSNFTESQAD CLLHRTPVQG FHIEKRHSTL VLCWQRKELV SISAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.16e-86GRAS family protein