PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157460.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 141aa MW: 15947.7 Da PI: 10.3841

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.7	6e-42	9	86	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l+efD++krsCr+rLa+hn+rrrk+++ XP_022157460.1 9 RCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVVTAGLTQRFCQQCSRFHVLTEFDNGKRSCRKRLADHNRRRRKTTQ 86 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
EPGSGIWVRC QAEGCNADLS QAKHYHRRHK VCEFHSKAST VVTAGLTQRF CQQCSRFHVL 60 TEFDNGKRSC RKRLADHNRR RRKTTQQSNQ GSPNSQPFET TSPTDAAARS TVDSTSQSSW 120 SVTMAMSPPQ MSLDRLNQRS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	8e-48	SBP family protein