PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157572.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 260aa    MW: 30337.5 Da    PI: 7.5076
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.11.6e-34131042102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k++++++d+++++li w + +nsf+v d+ e+++++Lp+yFkh+nf+SFvRQLn+YgFkkv+ ++         weF+ ++F +g+k+ll++
  XP_022157572.1  13 FVMKTFQMVNDPTTDDLIAWGNANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTYGFKKVDPDK---------WEFASHWFLRGQKHLLKN 98 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+++
  XP_022157572.1  99 ISRRRH 104
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEANNQNDTV APFVMKTFQM VNDPTTDDLI AWGNANNSFI VADPLELSRR ILPSYFKHNN  60
FSSFVRQLNT YGFKKVDPDK WEFASHWFLR GQKHLLKNIS RRRHNRNSYF QVKCEDDEEL  120
AMEIAKLKEE QRALEIEVES MNKRIEATEK RPQQMMAFLY KIIENPEIJP RMILQNRRIR  180
QQSVSESDLL EPDTSDFKSD QGNRPSESKP INRGLRFTNF SSNLILSPSC LLTSASEILP  240
SCAGLPLTFR VRTRIEFEID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-86HSF family protein