PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157667.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 249aa MW: 27574.7 Da PI: 9.4372

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v +G g+W++++++ g++R++k+c++rw +yl XP_022157667.1 14 RGLWTAEEDAKILAYVSNHGVGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	49.4	1e-15	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E++l++++++ G++ W++Ia+ ++ gRt++++k++w++ XP_022157667.1 69 SFTPQEEDLIIKLHQAIGSR-WSLIAKQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MGKPPCCDKS NVKRGLWTAE EDAKILAYVS NHGVGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLRHDSF TPQEEDLIIK LHQAIGSRWS LIAKQLPGRT DNDVKNYWNT KLRKKLSKLG 120 IDPITHKPFS QILFDYGTIS SSSSSSTPKP PIPAFNTTMA KPHQPFSGIX QTPIRPQFFN 180 EPPTSSSSSS STSSSSLSQS SDGFVLGQRS EGSSSNSSSS FNSFVDALLE QDFQIKGSFP 240 EILEACFDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	5e-78	MYB family protein