PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157686.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 646aa MW: 73345.8 Da PI: 6.5928

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.7	1.8e-07	460	493	17	55
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N++f L+++lP+ + K sKa+iL +++Y+k+L+ XP_022157686.1 460 NEKFMALKSMLPSfN------KISKASILNDTIKYLKMLE 493 99*********55......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MANGTENCDS EPGLLRKQLA VAVKSIQWSY AIFWASSTRQ HGVLEWSDGY YNGDIKTRKT 60 VQAEDVHVDK MGLHRSEQLR ELYKSLLEGE TEQRIKKPPA SLSPEDLSDA EWYYLVCMSF 120 VFNQGQGLPG RALADSQTIW LCNAQYAESN VFSRSLLAKS AAIQTVVCFP YLGGVIELGV 180 TEQVLEDPNL LQHVKDFLLK FSKPICSKKP SSASYKDDNG KEQMGAKPDN EIVEVLALEN 240 RYKEVNRILR RNDKEFSIDS LDDLSNGYEQ YHKMEEDPLR LEGVDGGASR FQXLQFLDDD 300 FSNGFQDSMN PSDCVSEALA NQEKVLSPSR PKGANSLTLK ELQNSNRTKS GSLDPRSDED 360 MHYRRTLFTI LGSSTQLVGS PLLPNVSNRS SFMPWKKRLA ERHMPPLVQQ KMLKKILFXV 420 PLLCSGSSLN RLKDGERSIL KQGNNDMCPN NVMHDKLIEN EKFMALKSML PSFNKISKAS 480 ILNDTIKYLK MLEARVQELE ACMDSLYYEE RLRRKYLDMV EQTSDNYDYE KIEGTLKXSM 540 NKRKACELDE TDLKLKNHIP QNGLRLDVKV SMKEQEVLVD MRCPYREYLL VDIMDAMNDL 600 QLDAHSVQSS DHNGVFSLTL KSKFRGIAAA SVGRIKLALL KVADKS

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MANGTENCDS EPGLLRKQLA VAVKSIQWSY AIFWASSTRQ HGVLEWSDGY YNGDIKTRKT  60
VQAEDVHVDK MGLHRSEQLR ELYKSLLEGE TEQRIKKPPA SLSPEDLSDA EWYYLVCMSF  120
VFNQGQGLPG RALADSQTIW LCNAQYAESN VFSRSLLAKS AAIQTVVCFP YLGGVIELGV  180
TEQVLEDPNL LQHVKDFLLK FSKPICSKKP SSASYKDDNG KEQMGAKPDN EIVEVLALEN  240
RYKEVNRILR RNDKEFSIDS LDDLSNGYEQ YHKMEEDPLR LEGVDGGASR FQXLQFLDDD  300
FSNGFQDSMN PSDCVSEALA NQEKVLSPSR PKGANSLTLK ELQNSNRTKS GSLDPRSDED  360
MHYRRTLFTI LGSSTQLVGS PLLPNVSNRS SFMPWKKRLA ERHMPPLVQQ KMLKKILFXV  420
PLLCSGSSLN RLKDGERSIL KQGNNDMCPN NVMHDKLIEN EKFMALKSML PSFNKISKAS  480
ILNDTIKYLK MLEARVQELE ACMDSLYYEE RLRRKYLDMV EQTSDNYDYE KIEGTLKXSM  540
NKRKACELDE TDLKLKNHIP QNGLRLDVKV SMKEQEVLVD MRCPYREYLL VDIMDAMNDL  600
QLDAHSVQSS DHNGVFSLTL KSKFRGIAAA SVGRIKLALL KVADKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-155	bHLH family protein