PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157687.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 639aa MW: 72574.2 Da PI: 6.8898

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.7	1.8e-07	453	486	17	55
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 N++f L+++lP+ + K sKa+iL +++Y+k+L+ XP_022157687.1 453 NEKFMALKSMLPSfN------KISKASILNDTIKYLKMLE 486 99*********55......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MACEPGLLRK QLAVAVKSIQ WSYAIFWASS TRQHGVLEWS DGYYNGDIKT RKTVQAEDVH 60 VDKMGLHRSE QLRELYKSLL EGETEQRIKK PPASLSPEDL SDAEWYYLVC MSFVFNQGQG 120 LPGRALADSQ TIWLCNAQYA ESNVFSRSLL AKSAAIQTVV CFPYLGGVIE LGVTEQVLED 180 PNLLQHVKDF LLKFSKPICS KKPSSASYKD DNGKEQMGAK PDNEIVEVLA LENRYKEVNR 240 ILRRNDKEFS IDSLDDLSNG YEQYHKMEED PLRLEGVDGG ASRFQXLQFL DDDFSNGFQD 300 SMNPSDCVSE ALANQEKVLS PSRPKGANSL TLKELQNSNR TKSGSLDPRS DEDMHYRRTL 360 FTILGSSTQL VGSPLLPNVS NRSSFMPWKK RLAERHMPPL VQQKMLKKIL FXVPLLCSGS 420 SLNRLKDGER SILKQGNNDM CPNNVMHDKL IENEKFMALK SMLPSFNKIS KASILNDTIK 480 YLKMLEARVQ ELEACMDSLY YEERLRRKYL DMVEQTSDNY DYEKIEGTLK XSMNKRKACE 540 LDETDLKLKN HIPQNGLRLD VKVSMKEQEV LVDMRCPYRE YLLVDIMDAM NDLQLDAHSV 600 QSSDHNGVFS LTLKSKFRGI AAASAGMIKL ALLKVANKS

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MACEPGLLRK QLAVAVKSIQ WSYAIFWASS TRQHGVLEWS DGYYNGDIKT RKTVQAEDVH  60
VDKMGLHRSE QLRELYKSLL EGETEQRIKK PPASLSPEDL SDAEWYYLVC MSFVFNQGQG  120
LPGRALADSQ TIWLCNAQYA ESNVFSRSLL AKSAAIQTVV CFPYLGGVIE LGVTEQVLED  180
PNLLQHVKDF LLKFSKPICS KKPSSASYKD DNGKEQMGAK PDNEIVEVLA LENRYKEVNR  240
ILRRNDKEFS IDSLDDLSNG YEQYHKMEED PLRLEGVDGG ASRFQXLQFL DDDFSNGFQD  300
SMNPSDCVSE ALANQEKVLS PSRPKGANSL TLKELQNSNR TKSGSLDPRS DEDMHYRRTL  360
FTILGSSTQL VGSPLLPNVS NRSSFMPWKK RLAERHMPPL VQQKMLKKIL FXVPLLCSGS  420
SLNRLKDGER SILKQGNNDM CPNNVMHDKL IENEKFMALK SMLPSFNKIS KASILNDTIK  480
YLKMLEARVQ ELEACMDSLY YEERLRRKYL DMVEQTSDNY DYEKIEGTLK XSMNKRKACE  540
LDETDLKLKN HIPQNGLRLD VKVSMKEQEV LVDMRCPYRE YLLVDIMDAM NDLQLDAHSV  600
QSSDHNGVFS LTLKSKFRGI AAASAGMIKL ALLKVANKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-156	bHLH family protein