PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157780.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 237aa MW: 26176.5 Da PI: 7.2378

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.2	1.5e-13	67	113	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr llP + K +Ka+ L k+ve +k+L XP_022157780.1 67 KNHKEAEKRRRERINSHLDKLRALLPCN-----SKTDKASLLAKVVERVKEL 113 58***********************8.....7***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MQPDQSSELY RFLAQNGAFN LGSASCGGFP AAQSFSSSSS YYPLESPAAA MEPPPPSPHD 60 RALAALKNHK EAEKRRRERI NSHLDKLRAL LPCNSKTDKA SLLAKVVERV KELKQQTAEM 120 AEVETLPSET DEISVLSGEE SDDGRLVFKA SLCCEDRSDL IPDLNDILNS LHLKTLRADI 180 VTVGGRIRNV LLIAAAQDHS IESLHFLHNA LKSLLERSNS SSDRSKRRRL LHTPPQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	230	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	1e-66	bHLH family protein