PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157872.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 249aa    MW: 28712.5 Da    PI: 6.4011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.86.1e-51101371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv++yL kk+++++ +   ++ e+d++++ePw+Lp+ +k + +ewyfFs rd+ky+tg r+nrat++gyWkatgkd+ v++ 
  XP_022157872.1  10 LPPGFRFYPSDEELVCHYLYKKIANEEASR-GTLVEIDLHTCEPWQLPEVAKLNGNEWYFFSFRDRKYSTGFRTNRATTAGYWKATGKDRMVMDP 103
                     79*************************888.78***************8888899***************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +ge+vg++ktLvfy++rap+g kt W+mhe+r+
  XP_022157872.1 104 mRGEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRI 137
                     9999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANEEASRG TLVEIDLHTC EPWQLPEVAK  60
LNGNEWYFFS FRDRKYSTGF RTNRATTAGY WKATGKDRMV MDPMRGEVVG MRKTLVFYRN  120
RAPNGIKTGW IMHEFRIETP HMPPKEDWVL CRVFHKSKPD QEITETTHSL QFPFDAAAAT  180
SSSFRSPPNH LGQFLPPDDA TGLLPWDTNM EETAAFRPNG VFGDSNMQEM KFEINDTMQN  240
GFPFNYFIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.15e-89NAC family protein