PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157918.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 309aa    MW: 34151.2 Da    PI: 6.5997
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +++++G+g+W++++   g+ R+ k+c++rw +yl
   XP_022157918.1 14 KGPWTPEEDIVLVSYIQEHGPGNWRAVPPNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding49.69e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022157918.1  67 RGNFTHHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGRPPCCDKQ GVKKGPWTPE EDIVLVSYIQ EHGPGNWRAV PPNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF THHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNHWNT HLKKKLNSSL  120
HRSPAAALSA AASAAADGGL FTSRGQWERR LQTDIHMAKQ ALSDALSPES SKPPPPPLPP  180
AEPKSPHEAP AYASSADNIA RWLKEWNKTT PPNSGLASSP ANTNSGNCGG GRANEVDLSE  240
SFLGFDSFES SNSDQSPATS VFQGESEMMD ESSVELLPME VLEKWLNEDG KDYCFSEIYV  300
DEKLKYDLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-93MYB family protein