PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157927.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 201aa    MW: 22038.2 Da    PI: 6.8677
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260137.64.4e-43381371100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da+sslvyeA ar+rdPvyG++g i +lq+q+++l+aela
  XP_022157927.1  38 PCAACKILRRRCAEKCVLAPYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELA 132
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022157927.1 133 KTQAE 137
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MECSEAKSNT TSTILRSQSP SPSPPPPPSI PAGVVVSPCA ACKILRRRCA EKCVLAPYFP  60
PSDPFKFTIA HRVFGASNII KLLQDLPESQ RADAVSSLVY EASARIRDPV YGCAGAICQL  120
QKQINELQAE LAKTQAELVN MHCHQASLVA LICKELAQTP PPVPPPDHRS LDNNFNIATP  180
QSYQNYTPFL EDSNIWEPLW T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.16e-69LBD family protein