PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157976.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 259aa MW: 30049.8 Da PI: 9.0321

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1e-18	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v+ +G g+W+++ar g++R +k+c++rw +yl XP_022157976.1 23 KGPWTAEEDKLLTEYVRIYGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_022157976.1 76 RGQITPHEETIILQLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MFNLGTMVGH WGWGVMEDEV WRKGPWTAEE DKLLTEYVRI YGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PHEETIILQL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKDPCD VNGKAKSRLL RRQQFHQQQL QQQQQFNALE TSKFKAVLEE HDNNKEASTS 180 SSASEAEIMK PELTNFHSQA SDQYEESLVS ELNSHGFLLP EVLSDGFLWD GLWSLEDVYG 240 NGQARGTRVS MSNLVAPFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13480.1	3e-72	MYB family protein