PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158021.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 237aa MW: 27112.1 Da PI: 10.0051

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.4	8.2e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev viifsst klyeyss XP_022158021.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTSKLYEYSS 59 8***********************************************96 PP
2	K-box	86.5	5.4e-29	80	170	8	98
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++i+el +k + ++++n++L kk+ XP_022158021.1 80 GISTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHQDNMELYKKV 170 378999**********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TSKLYEYSST 60 SMKTLIERYN KTKEEQHQLG ISTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSV 120 KDLQNLENQL EISLRGVRMK KDQILMDEIQ ELNRKGNLIH QDNMELYKKV NLIHQENLEL 180 YKKVYGTKGA NGAHTSSLTN GLGVGEEADI PINLQLSQPQ NHKAPERATK LGRLQLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-107	MIKC_MADS family protein