PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158073.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 270aa    MW: 29967.6 Da    PI: 8.1106
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11153200455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_022158073.1 153 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 200
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDPPTLMNQP PFPNNPNATP NLTPYNLSEI WQFPINGAAT GVAESGPGLG LRVPHFPHFG  60
EVSPTDPLCV SALQLQHRHG ASKKRRDADQ DSPKNDSGGK RLKTVACRDD NHESKAEAEP  120
RSGKAEQNSQ PPPEQPKQDY IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPGCN  180
KVIGKALVLD EIINYIQSLQ RQVEFLSMKL EAVNTRISPS MEMFPSKDYG QQTFDTTGVA  240
FGSQATREYS RGSSPEWLHM QIGGGFERTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-89bHLH family protein