PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158185.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 519aa MW: 56436.9 Da PI: 6.0914

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.5e-13	335	380	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_022158185.1 335 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 380 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
VSMTQSFMTG VGLPGQAFFD SSPVWVAGSD RLAGSFCERA HQGQVFGLQT MVCIPSANGV 60 VELGSSEVIF QSSDLMNKVR VLFNFNNLEV ETWPISGVDQ GENDPSSLWI TEPPNVIEIK 120 DPLNNTVASA PAPAPAPSPS PAPSTTNSQQ VSKITHTENP KSSVVTGTPS SVPSQKSQQS 180 HRQSQPVHTQ SFFTRELNFS EFGYDNSSLK DGNSHSLKPE SGEILNFGES KRSSYPSADN 240 LASGNSQFAA DENRKKRSPT SRGSNEEGML SFTSGVIVPS SGAVKSSGCI GGDSDHSDLE 300 ASVIREVESS RVVEPEKRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN 360 VSKMDKASLL GDAISYINEL RGKLQTAESD KEELEKQLEA VKKLMSSKES SCISSSSEPP 420 PDQDIKGSNI HGNNNGIETD IDVKIISWDA MIRIQSSKKN YPAARLMAAL EDLDLDINHA 480 SISVVNDLMI QQATVKMGSR LYTQEQLRIA LLSKMGATR

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

VSMTQSFMTG VGLPGQAFFD SSPVWVAGSD RLAGSFCERA HQGQVFGLQT MVCIPSANGV  60
VELGSSEVIF QSSDLMNKVR VLFNFNNLEV ETWPISGVDQ GENDPSSLWI TEPPNVIEIK  120
DPLNNTVASA PAPAPAPSPS PAPSTTNSQQ VSKITHTENP KSSVVTGTPS SVPSQKSQQS  180
HRQSQPVHTQ SFFTRELNFS EFGYDNSSLK DGNSHSLKPE SGEILNFGES KRSSYPSADN  240
LASGNSQFAA DENRKKRSPT SRGSNEEGML SFTSGVIVPS SGAVKSSGCI GGDSDHSDLE  300
ASVIREVESS RVVEPEKRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN  360
VSKMDKASLL GDAISYINEL RGKLQTAESD KEELEKQLEA VKKLMSSKES SCISSSSEPP  420
PDQDIKGSNI HGNNNGIETD IDVKIISWDA MIRIQSSKKN YPAARLMAAL EDLDLDINHA  480
SISVVNDLMI QQATVKMGSR LYTQEQLRIA LLSKMGATR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	325	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-133	bHLH family protein