PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158363.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 175aa    MW: 19307 Da    PI: 9.0756
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.0006105127123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp Cg  F+    L  H+r+H
  XP_022158363.1 105 HQCPVCGLQFPIGQALGGHMRRH 127
                     79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MKREREEGEL EVFDMVDSLM LLSRVGEYNN DQQRPEEPQR KNSSPAAADS GNGKVLICKT  60
CKREFKSFQA LGGHRASHGK AKFMDVNSAE VFNPLRPPPA KSGTHQCPVC GLQFPIGQAL  120
GGHMRRHRST AAAAAVLKKS DGREVRVFGV DLNLAPVDNN NLKLQLMTPF VDCFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.13e-32C2H2 family protein