PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158366.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 257aa    MW: 28177.3 Da    PI: 5.4141
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed llv++++q+G g+W++ +++ g+ R++k+c++rw +yl
   XP_022158366.1 15 KGPWTAREDALLVNYIQQHGEGHWRSLPKKAGLLRCGKSCRLRWMNYL 62
                     79******************************99************97 PP
2Myb_DNA-binding537.7e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++Ed+l+++++ +lG++ W++Ia +++ gRt++++k++w+++l
   XP_022158366.1  68 RGNITADEDDLIIKLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRTSSCCSN GGLHKGPWTA REDALLVNYI QQHGEGHWRS LPKKAGLLRC GKSCRLRWMN  60
YLRPDIKRGN ITADEDDLII KLHSLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKRLAVT  120
ATENTRNQAR KERITIPSNS ENGESSKTTK PTRVSSFCDE DNSSSGVASA LPLSSGNPGG  180
GGGGGGAEIE LAAKGEEEKI ESGDLFGGCE ILYGGSWNCS ANGEMIDEVE DDSYQQLFNL  240
QGEDYIQLDS FIDYFLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-63MYB family protein