PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158400.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 174aa    MW: 19839 Da    PI: 4.5463
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-16243548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     T++E+ l +d++ ++G++ W++Iar+++ gRt++++k++w++++
   XP_022158400.1  2 TPQEEHLVLDLHSKWGNR-WSRIARKLP-GRTDNEIKNFWRTHM 43
                     9*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MTPQEEHLVL DLHSKWGNRW SRIARKLPGR TDNEIKNFWR THMRKIAQEK KKAAAATTVI  60
LSPSSSSNCS LASNNPAIDS LPSVEIGEES FYDTGGHRVE NTEEEEDYSM DDIWRDIDQT  120
VCDDEKMMCN FSWAPVASPP WEYGQYPPWK VAEEENKAFA AMNIYDHGEA VALT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.28e-40MYB_related family protein