PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158410.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 228aa    MW: 25312.5 Da    PI: 4.4711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-193281255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  XP_022158410.1 32 RFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 81
                    678******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDFTDSKTNS TSTSSKPRRK QQEQQQQQET TRFLGVRRRP WGRYAAEIRD PSTKERHWLG  60
TFDTAEEAAL AYDRAARSMR GSKARTNFVY SDMPHGSSIT SIISPDESAD AFPPPIPTPT  120
QNDQLSFALH DPFATSPFPG NNWLSNSDFD HDVDLPSNYQ PVTAFMDTGM PQADSTELPP  180
LPPDASSSYN EYAFMSYDSN AAVLPPFPDT PADGYGFGFG GSSSTYFY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11621KPRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-33ERF family protein