PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158465.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 317aa    MW: 34095.6 Da    PI: 5.5679
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-1280124347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
   XP_022158465.1  80 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 124
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MVEFDSKNVI NLICRKSFSA SMGNLSHYAG SGSGALQGGS NTPASPGETP EHGVAADGYA  60
SEDFVPGSSS SCRERKKGVP WTEEEHRMFL LGLQKLGKGD WRGIARNYVI SRTPTQVASH  120
AQKYFIRQTN VSRRKRRSSL FDIVADEPVE TSIVQQDFLS VNSSHAGETQ SNNPLPTPPT  180
VDEECESMDS TNSNDGEPAP PNSDGPQCVY PVVYPAYVAP FFPFSIPFYS EYSAETTNKE  240
ETHEVLKPTA VHSKSPLNVD ELIGMSKLSL GESIGHAGPS SLSLQLLEGS SRRSAFHANP  300
ASGSENMNSG GSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.16e-92MYB_related family protein