PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158507.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 343aa MW: 38023.2 Da PI: 7.1081

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.5	1.5e-31	66	175	2	109
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ ++ +s + + +s ++ ns + XP_022158507.1 66 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSGTTLgLNFQSMLAHTNSYGSefkinpr 160 689*************************************************************6666644442223332222222223333233 PP TCP 89 ......kaaksaakskksqksaasaln 109 + ++k++ + n XP_022158507.1 161 degeeeR----------QHKND--TPN 175 2222111..........11111..111 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MHKHNDERHK MITNSREEDN SPSKLEADHT GKVSKCKSSA EAAASSSSSP WLRLKDPRIV 60 RVSRAFGGKD RHSKVCTIRG LRDRRVRLSV STAIQLYDLQ DRLGLNQPSK VVDWLLNAAK 120 DEIDELPPLP IPSGTTLGLN FQSMLAHTNS YGSEFKINPR DEGEEERQHK NDTPNSSHPP 180 SFSALLNNVV ANGNAPFGYH WEPSNLPFLS SSSHHPTGSH GFFTSQAAAA EDLHNFNVLS 240 LPRPLPNLSL STGSQILVCP PGISQTSLDQ LDPRQVNNHL QMFTSSSQNF LLHNNCLTSP 300 LNSINQPPNN VRPFHFSMAP KFVSQEKNNG DQPNKDDEFA SDE

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MHKHNDERHK MITNSREEDN SPSKLEADHT GKVSKCKSSA EAAASSSSSP WLRLKDPRIV  60
RVSRAFGGKD RHSKVCTIRG LRDRRVRLSV STAIQLYDLQ DRLGLNQPSK VVDWLLNAAK  120
DEIDELPPLP IPSGTTLGLN FQSMLAHTNS YGSEFKINPR DEGEEERQHK NDTPNSSHPP  180
SFSALLNNVV ANGNAPFGYH WEPSNLPFLS SSSHHPTGSH GFFTSQAAAA EDLHNFNVLS  240
LPRPLPNLSL STGSQILVCP PGISQTSLDQ LDPRQVNNHL QMFTSSSQNF LLHNNCLTSP  300
LNSINQPPNN VRPFHFSMAP KFVSQEKNNG DQPNKDDEFA SDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	3e-46	TCP family protein