PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158577.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 238aa MW: 27264.1 Da PI: 8.9866

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.6e-05	6	27	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C+ksFs+ + H+r+H XP_022158577.1 6 VCKICSKSFSNGKAMGGHMRSH 27 6*******************99 PP
2	zf-C2H2	14.1	0.00014	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+ksF++ L H +H XP_022158577.1 134 FKCKTCDKSFRSYQALGGHKASH 156 89**********99999888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MDKQRVCKIC SKSFSNGKAM GGHMRSHLIK LPLHPNPKRI PIPMPMSMPI PTSIHSHYSD 60 RESETDDLPP KQRRRRSLKR KRHDPTIECA AALSLVMMSR DQTTEKSQKL SDKESNYTCK 120 DEDGEDVDSF IWKFKCKTCD KSFRSYQALG GHKASHSKIR TEDCVHQKVF QCLFCPKVFE 180 SGQALGGHKK VHFFKKISPK KFGKNSIDLN RPPPAYDYDE DDEDEVSEIE FSAISNPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	81	RRSLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-19	C2H2 family protein