PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158753.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 151aa    MW: 16973 Da    PI: 8.4724
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.52.7e-095479227
                    -S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                    ++  C++f rtG+C+yGd+Ck+ H++
  XP_022158753.1 54 GRGVCNRFVRTGFCQYGDSCKYFHPK 79
                    5668********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MPLGKYYCDY CEKQFQDTPF ARKRHLHSLS HQKAKALWFD SFRDPNQAFS DGFGRGVCNR  60
FVRTGFCQYG DSCKYFHPKN NPQNSSTQPI AGFPEYSNQA SNIPVNQFVE GSSLTGNLVS  120
NRMGTSWGNL PPSLMPPPEG GYPPLPIVDW G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.11e-36C3H family protein