PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158812.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 240aa MW: 26955.1 Da PI: 8.0893

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++ +G g+W++ ++ g+ R++k+c++rw +yl XP_022158812.1 14 KGAWTKEEDQRLIDYIQIHGDGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	60.1	4.8e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +Edel+++++ +lG++ W++Ia++m+ gRt++++k++w+++ XP_022158812.1 67 RGNFTDDEDELIINLHSLLGNK-WSLIAARMP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MGRSPCCEKE HTNKGAWTKE EDQRLIDYIQ IHGDGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TDDEDELIIN LHSLLGNKWS LIAARMPGRT DNEIKNYWNT HIKRKLYARG 120 IDPQTHRPLL HKPSAATDIH RRRPSAKPSA TSAEDSSSSS CVTTEVEDNN NNNPPLNLEL 180 SIALPCDNST QPKNGQQDHP RPAAAGAAVL FQFGGGDTAE ETESSVHHHV FRYYSTPFTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	2e-86	MYB family protein