PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158889.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 464aa MW: 51258.7 Da PI: 7.2061

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00054	361	393	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L++++ YIk Lq XP_022158889.1 361 DRITALQQIVSPF-----GKTDTASVLTETIGYIKFLQ 393 7788888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MGDECTESSV ATSSTPPNWW DSHNHNHHHH GSPSLSSYSS HWPHQNPNSN TSCDQDVSLS 60 TSSFHSALTV ESSRRLFDPL PSDNQLWTQV LLNIGNGVEL QSDEQEIGEN FLEAISSKNI 120 STTGIFESAA CSDYLKKMDT NYNNNWNSFP IFDANNNNNN NNGLITTHSH AAENERLLKL 180 SSLVNTWSIA LPMDDEPDHL RAATVPCFGH GLKAEAPEAG TVAPIRLEPG AALFRRSFGS 240 GGFQNSIGAK QYDHSMQLDN AGTRNFADYI SFNGRLGKPV ININGINNPC FKSLNLSADT 300 KKQIHQTSSP TRISGRGSGV SSEGKKKRSE ECSETATKKT KQENATAASN KMQQPKVKLG 360 DRITALQQIV SPFGKTDTAS VLTETIGYIK FLQEQIQLLS NPYMKTNAYK DPWKSTERKD 420 PKGDGKIDLR SRGLCLVPIS CTPQVYRENT GSDYWTPYRG CFYR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MGDECTESSV ATSSTPPNWW DSHNHNHHHH GSPSLSSYSS HWPHQNPNSN TSCDQDVSLS  60
TSSFHSALTV ESSRRLFDPL PSDNQLWTQV LLNIGNGVEL QSDEQEIGEN FLEAISSKNI  120
STTGIFESAA CSDYLKKMDT NYNNNWNSFP IFDANNNNNN NNGLITTHSH AAENERLLKL  180
SSLVNTWSIA LPMDDEPDHL RAATVPCFGH GLKAEAPEAG TVAPIRLEPG AALFRRSFGS  240
GGFQNSIGAK QYDHSMQLDN AGTRNFADYI SFNGRLGKPV ININGINNPC FKSLNLSADT  300
KKQIHQTSSP TRISGRGSGV SSEGKKKRSE ECSETATKKT KQENATAASN KMQQPKVKLG  360
DRITALQQIV SPFGKTDTAS VLTETIGYIK FLQEQIQLLS NPYMKTNAYK DPWKSTERKD  420
PKGDGKIDLR SRGLCLVPIS CTPQVYRENT GSDYWTPYRG CFYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	4e-62	bHLH family protein