PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158904.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family WOX
Protein Properties Length: 208aa    MW: 23081.5 Da    PI: 9.2451
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.95.3e-211877357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +R+++tkeq+ +Le+l+++  r+psa+++ e++++l    +++ ++V++WFqN++a++++
  XP_022158904.1 18 SRWNPTKEQIGILENLYKQgVRTPSADQIHEITNSLkaygHIEGKNVFYWFQNHKARQRQ 77
                    7*****************99**************************************97 PP
2Wus_type_Homeobox116.41.4e-371679265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       a++RW+Pt+eQi iLe+lyk+G+rtP++++i++it++L++yG+ie+kNVfyWFQN+kaR+rqkq
     XP_022158904.1 16 ASSRWNPTKEQIGILENLYKQGVRTPSADQIHEITNSLKAYGHIEGKNVFYWFQNHKARQRQKQ 79
                       689***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEVDGGVRSE VGGAPASSRW NPTKEQIGIL ENLYKQGVRT PSADQIHEIT NSLKAYGHIE  60
GKNVFYWFQN HKARQRQKQK QQSLALFSHF LHFNSNPYSS PNVGCSPYYV HQNDVGLYPP  120
YHNNSKALQS SGIARRRSKS ERRNSNGEIE VSAINLNIQT ETLSLFPTHP TGDLQVGPLP  180
PTSSETSADH SSAGVSSSGR GTYFDFFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.13e-39WOX family protein