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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_022158994.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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| Family | GeBP | ||||||||
| Protein Properties | Length: 232aa MW: 27534.9 Da PI: 8.5508 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 52.2 | 1.7e-16 | 58 | 144 | 7 | 97 |
DUF573 7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
w eeDe+ +L+ l +f k+ ++fyefvkk++ +vs +q+ +Kir L++K+ ++ + + s s++h++k++ +sk+iWg
XP_022158994.1 58 WREEDEVFVLKQLYEFSGKNA----TYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLENDECNGLKFCGSGSQQHQRKVLAWSKRIWG 144
****************65555....34689*********************************9955555567899**************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 232 aa Download sequence |
MSEYYSNSSE DERSSDTEYR VESESESDSE DEQRRRRRRR RHTKPKTKKK KAALSFKWRE 60 EDEVFVLKQL YEFSGKNATY SEEFYEFVKK KLGGQVSMHQ MRNKIRGLRR KYLENDECNG 120 LKFCGSGSQQ HQRKVLAWSK RIWGAAENEN ENKNKNGGGT RSVEQYERGF VESLEEMEIE 180 MDCLKPSCLE FLYKDWEIQT LMHVQLLSNK CKLDAKLTEL CIQFLNTPTN TK |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 33 | 39 | QRRRRRR |
| 2 | 34 | 39 | RRRRRR |
| 3 | 34 | 40 | RRRRRRR |
| 4 | 34 | 41 | RRRRRRRR |
| 5 | 34 | 51 | RRRRRRRRHTKPKTKKKK |
| 6 | 35 | 40 | RRRRRR |
| 7 | 35 | 41 | RRRRRRR |
| 8 | 35 | 42 | RRRRRRRR |
| 9 | 35 | 52 | RRRRRRRRHTKPKTKKKK |
| 10 | 36 | 41 | RRRRRR |
| 11 | 36 | 53 | RRRRRRRRHTKPKTKKKK |
| 12 | 37 | 54 | RRRRRRRRHTKPKTKKKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G61730.1 | 2e-11 | GeBP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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