PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158998.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GeBP
Protein Properties Length: 234aa    MW: 27215.3 Da    PI: 8.557
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57354.14.5e-1763150698
          DUF573   6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske.hdqkifelskkiWgs 98 
                      ws +De v+L+ + +f+ k+g s+s   ++fy+fvk+++s++vs+sql++K+ rL+k+f k++ k k    ++fsk  + +k +e+s+ iWgs
  XP_022158998.1  63 HWSWSDECVILKNFYEFAGKNG-SYS---KDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLKDECKGK--IRMKFSKGnQLEKLYEMSNNIWGS 150
                     5****************99999.434...56********************************99944..4455555404489*********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MATNRYEIEG DDSGTNSKTG SETEDEGSRK MSSLKRGREK DEEKCSSPNS KEESKKSKKM  60
GFHWSWSDEC VILKNFYEFA GKNGSYSKDF YHFVKNKLSV DVSNSQLSDK VYRLRKRFLK  120
DECKGKIRMK FSKGNQLEKL YEMSNNIWGS NSNTQNTQSG GNQWKAEAVN RLCEEMFERV  180
IENVKVDISC IPPNVLXDIR KDWEQMKMAQ DEYELKNANL LLQISHIRCT QNNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-10GeBP family protein