PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159157.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARF

Protein Properties

Length: 682aa MW: 76182 Da PI: 6.6276

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.7	1.1e-23	117	218	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e+ +++++ +++l +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + ++ XP_022159157.1 117 FCKILTASDTSTHGGFSVLRKHATEClppldMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GGNG 209 99**************************9555555669********************************************4..3789 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 el+v+v+r+ XP_022159157.1 210 ELRVGVRRQ 218 99**996 PP
2	Auxin_resp	101.3	1.2e-33	243	322	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F+++++k+++++ + ++vGmRfkm+fe+eds+ rr++Gt+vgv d++p +W++SkWrsLk XP_022159157.1 243 ASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETVINGFCVGMRFKMRFEGEDSPDRRFTGTIVGVGDISP-QWSDSKWRSLK 322 689*************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MTHPKGLEGE NLYQELWKAC AGPLVEVPVN GERVFYFPQG HMEQLEESTN QELNHQIPHF 60 DLPPKILCRV VNTRLLAEKE TDEVYAQITL YPEADQSEPQ SPDPEPPERT RQSVHSFCKI 120 LTASDTSTHG GFSVLRKHAT ECLPPLDMSQ STPTQELAAK DLHGYEWKFK HIFRGQPRRH 180 LLTTGWSTFV TSKRLVAGDA FVFLRGGNGE LRVGVRRQAR QQCVMPSSVI SSHSMHLGVL 240 ATASHAVRTQ TYFVVYYKPR TSQFIISLNK YLETVINGFC VGMRFKMRFE GEDSPDRRFT 300 GTIVGVGDIS PQWSDSKWRS LKIQWDEAAT ILRPERVSPW EIEPFVPSAS LNFTHPITKS 360 KRARPVEIPP PEMTSSLAPS GFWLHGSTVP QVSGGNEVVQ SGDNQAAWAV GQQKLNSNVD 420 TNSSSHCNSL ALVEGIWPSP PPHLNISLKL CPDSTCEREL APKHPLPSPY SPSVTSKPST 480 NLIQHDQVEK ANKPDTSLGC RIFGIDLKNN SSILSSSMET KPCSPNTVSQ ADAEQVSQPS 540 KEQQQVMTSE PLTKGMQTKH ASNLSSRTRT KVQMEGAAVG RAVDLTTLEG YDDLINELEN 600 VFEIKGELRE VNKWAVVFTD DENDMMLVGD DPWPEFCKMV KRIFIYSSEE VKKMSSKSKL 660 VSPSSLDHQI TNSLDSERKT ES

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MTHPKGLEGE NLYQELWKAC AGPLVEVPVN GERVFYFPQG HMEQLEESTN QELNHQIPHF  60
DLPPKILCRV VNTRLLAEKE TDEVYAQITL YPEADQSEPQ SPDPEPPERT RQSVHSFCKI  120
LTASDTSTHG GFSVLRKHAT ECLPPLDMSQ STPTQELAAK DLHGYEWKFK HIFRGQPRRH  180
LLTTGWSTFV TSKRLVAGDA FVFLRGGNGE LRVGVRRQAR QQCVMPSSVI SSHSMHLGVL  240
ATASHAVRTQ TYFVVYYKPR TSQFIISLNK YLETVINGFC VGMRFKMRFE GEDSPDRRFT  300
GTIVGVGDIS PQWSDSKWRS LKIQWDEAAT ILRPERVSPW EIEPFVPSAS LNFTHPITKS  360
KRARPVEIPP PEMTSSLAPS GFWLHGSTVP QVSGGNEVVQ SGDNQAAWAV GQQKLNSNVD  420
TNSSSHCNSL ALVEGIWPSP PPHLNISLKL CPDSTCEREL APKHPLPSPY SPSVTSKPST  480
NLIQHDQVEK ANKPDTSLGC RIFGIDLKNN SSILSSSMET KPCSPNTVSQ ADAEQVSQPS  540
KEQQQVMTSE PLTKGMQTKH ASNLSSRTRT KVQMEGAAVG RAVDLTTLEG YDDLINELEN  600
VFEIKGELRE VNKWAVVFTD DENDMMLVGD DPWPEFCKMV KRIFIYSSEE VKKMSSKSKL  660
VSPSSLDHQI TNSLDSERKT ES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61830.1	0.0	ARF family protein