PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159215.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 345aa MW: 38788.1 Da PI: 6.9631

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	101.2	5.8e-32	87	191	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 f+kv tpsdv+k++rlv+pk++ae++ ++++e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + XP_022159215.1 87 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLILNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFQRGlGDsAK 181 89**************************66677899***********************************************66677788 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l++ ++r+ XP_022159215.1 182 DRLFIDWRRR 191 8999999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
LKIMDFLTKA AKDCGEEDQE EEESEDQEMR HNNNNKNNVI ACDFFPHHHH QDHHHQPADL 60 MDLTLRIDAH GGGDGGNELA VEREHMFDKV VTPSDVGKLN RLVIPKQHAE KYFPLDSSSN 120 EKGLILNFED RNGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKKLDAGDVV SFQRGLGDSA 180 KDRLFIDWRR RPEAPRPHHQ YFSNPLLLRW HPPPPPRRSI HMNYSTLYPN YAFQMPNSGM 240 GGGGGANNSV YYFRPPMAAA SSSYRVGEII NQGCSSMAVN KGGSGGSTTA AKRLRLFGVN 300 MECSAPDDGE GGGGDLSNGD VSMEAADQIS RRGKQPLSLN WDLLH

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

LKIMDFLTKA AKDCGEEDQE EEESEDQEMR HNNNNKNNVI ACDFFPHHHH QDHHHQPADL  60
MDLTLRIDAH GGGDGGNELA VEREHMFDKV VTPSDVGKLN RLVIPKQHAE KYFPLDSSSN  120
EKGLILNFED RNGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKKLDAGDVV SFQRGLGDSA  180
KDRLFIDWRR RPEAPRPHHQ YFSNPLLLRW HPPPPPRRSI HMNYSTLYPN YAFQMPNSGM  240
GGGGGANNSV YYFRPPMAAA SSSYRVGEII NQGCSSMAVN KGGSGGSTTA AKRLRLFGVN  300
MECSAPDDGE GGGGDLSNGD VSMEAADQIS RRGKQPLSLN WDLLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	5e-72	B3 family protein