PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022159370.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family SBP
Protein Properties Length: 129aa    MW: 13634.3 Da    PI: 8.6088
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022159370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP82.84.7e-2680129150
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 
                     +CqvegC++dls+ak y++rhkvC++hsk+p+v+v+gleqrfCqqCsrfh
  XP_022159370.1  80 RCQVEGCRVDLSDAKAYYSRHKVCTMHSKSPKVIVAGLEQRFCQQCSRFH 129
                     6************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MEMDCSSLTE SGGSSTSSPH NSSAESVNGL KFGQKIYFED VGIGELPKSG GGSFSSSAGI  60
ATAPTKKARG GVVQAAQPPR CQVEGCRVDL SDAKAYYSRH KVCTMHSKSP KVIVAGLEQR  120
FCQQCSRFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.15e-30SBP family protein