PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022159422.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family SBP
Protein Properties Length: 250aa    MW: 26990.7 Da    PI: 9.5944
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022159422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP33.31.3e-101225576
                    --SS--S-STTTT-------S- CS
             SBP 55 fDeekrsCrrrLakhnerrrkk 76
                    fD++krsCrrrLa+hnerrrk+
  XP_022159422.1  1 FDQGKRSCRRRLAGHNERRRKP 22
                    9*******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
FDQGKRSCRR RLAGHNERRR KPPPGSLLST RYGRFSSSIF ENSSRVGSFL MDFSAYPKLT  60
GRDVWSAMKS SERVPGNQTI TAMGKYTPHP WQSSSENNPS ELFVPGSAVG TSFSGPGNPS  120
GECINGVTDS TCALSLLSNQ TWGSRNRTSS ALEVNALLNV EGALVAQTTA THAAANHFPT  180
APWGFKGNEA AASSSSQDHL TSDLGLNQVS QALTSFSGDV QFPHHQGRRS YMELGHSSAF  240
NSTQHLHWSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.11e-21SBP family protein