PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022159560.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 234aa    MW: 24655.5 Da    PI: 4.553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022159560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1663110355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r ++ +g+Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+++l+g
  XP_022159560.1  63 YRGIR-CR-SGKWVSEIREPRK---TTRIWLGTFPTPEMAAAAYDVAALALRG 110
                     9***9.55.6*********843...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MADQKLPIND SQMDQSPHQP APPSHPIDPS PPVPTSQFPK SKEPNSSSSS MASSISTKKH  60
ALYRGIRCRS GKWVSEIREP RKTTRIWLGT FPTPEMAAAA YDVAALALRG GDAVLNFPAS  120
IGSYPIPPST SPVDIRTAAS AAAAIAANNA LKKGEAVGQS AGGGSVEDTT TTVATDSTTT  180
SPEFVDEEEL FGMPSLLADM AEGMMVSPPR MNSPPPSDDS MENSDGTESL WSYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-40ERF family protein