PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159603.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 364aa MW: 41631.6 Da PI: 6.8328

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.8	3e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_022159603.1 16 VPPGFRFHPTEEELLHYYLRKKVGFQKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKII 109 69**************************.9***********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +gl+ktLvfykgrap+g+k+dW+mheyrl XP_022159603.1 110 YT-GSRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9.999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MAEQDMTLSV NGQSRVPPGF RFHPTEEELL HYYLRKKVGF QKIDLDVIRD VDLNKLEPWD 60 IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKIIY TGSRRIGLRK 120 TLVFYKGRAP HGQKSDWIMH EYRLNDSDRD CDRDNNVCNS MGEVAEDGWV VCRVFKKKNY 180 QKSVDSPKTS PSSIDSEAQL LSSGNDVVLD QILQYMGRTC KLETESFKIN NMNMNNTNSK 240 SFMHLPRLDS PTTLPVHQET ASFNHEAMLS LSELSEPSPS PGRHVVKLDN WVALDRLVAS 300 QLNCHELERP NMGEDQEEDH DHDHLQLSHF RSSRGLGFGH DTDIWGFTKS SSPSSLDPLS 360 HLSV

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MAEQDMTLSV NGQSRVPPGF RFHPTEEELL HYYLRKKVGF QKIDLDVIRD VDLNKLEPWD  60
IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKIIY TGSRRIGLRK  120
TLVFYKGRAP HGQKSDWIMH EYRLNDSDRD CDRDNNVCNS MGEVAEDGWV VCRVFKKKNY  180
QKSVDSPKTS PSSIDSEAQL LSSGNDVVLD QILQYMGRTC KLETESFKIN NMNMNNTNSK  240
SFMHLPRLDS PTTLPVHQET ASFNHEAMLS LSELSEPSPS PGRHVVKLDN WVALDRLVAS  300
QLNCHELERP NMGEDQEEDH DHDHLQLSHF RSSRGLGFGH DTDIWGFTKS SSPSSLDPLS  360
HLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-104	NAC family protein