PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159635.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 250aa MW: 28029.6 Da PI: 8.3454

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.4e-11	83	133	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ + +++Lr+llP ++K s + +++v+YI++ q XP_022159635.1 83 IIHRDVERQRRQEMSTLYANLRSLLPLeY---LKGKRSICDHMQETVKYIQHTQ 133 5699*********************77...9****************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MELACFESPF PFDQVEELFP LPSLSSLDIP VPTLPFSSSM EKSSDNNVSQ KPKNGRRRKS 60 PNNTTSDDAG CYNNPNEHKK KKIIHRDVER QRRQEMSTLY ANLRSLLPLE YLKGKRSICD 120 HMQETVKYIQ HTQANIQKLS NKRDELKRLS GHDDAASDTA TIETLNSSKR DSVSVAVNQK 180 QGGVQVVLHT PTHHGLPLST ILQALIAQKF DILSCISTKV NDSFLHTIDS QAAALTNVDV 240 SELQHKLTNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	82	RRRKSPNNTTSDDAGCYNNPNEHKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	1e-36	bHLH family protein