PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159685.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 235aa MW: 26696.1 Da PI: 6.6604

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv + +G +W++ ++ g++R++k+c++rw +yl XP_022159685.1 14 KGPWTAEEDNKLVTFILTYGHCCWRALPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	48.7	1.7e-15	73	111	7	47
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_022159685.1 73 AEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNYWNTH 111 69************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGRQPCCDKI GVKKGPWTAE EDNKLVTFIL TYGHCCWRAL PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL DDAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNYWNT HIKKKLIKMG 120 MDPVTHQPLQ KQPSCSEGSS STTDSSAAIS SLSEANFAGK DQALTSHMWV ETLRDDPWLN 180 FPTWGSEINS DFGSYSSEDS LNRLLDYYKE LGDEDFEFGS LGDFDKQLVG MWPSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	1e-85	MYB family protein