PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022159723.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 231aa    MW: 26145.6 Da    PI: 10.5605
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022159723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF54.51.5e-171352342
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    i n+s r+ tf kR+ g++KK +ELS+LC++e++ i+fs+
  XP_022159723.1 13 IANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSP 52
                    89*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRMTRKKVKL AYIANDSARK ATFKKRKRGL MKKVSELSTL CGIEACAIVF SPYDSQPELW  60
PSPLGVQRVL SHFKKMPEME KSKKMVNQET FLRQRIAKAN EQVKKMRKEN REKEMTRLMF  120
QSLTGAKGLQ GLTMVDLNDL GWLIDHNLKD ITKRIESLTK PSPPQPPPPP PPQPQPHAAA  180
WLMDLVSVSP HQDQGMGGLG LGLVGEDMLL PFGDHFSNHN NNAMWSNAFF P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1527RKKVKLAYIANDSARKATFKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.15e-51M-type_MADS family protein