PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022159751.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 297aa MW: 33547.1 Da PI: 8.5072

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022159751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.4e-14	92	143	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ Ave++k+L+ XP_022159751.1 92 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAVEFVKELE 143 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MSLDALSNSN DLFNFIIFDT IAATPSNDSH RHPDSSENSL IFSDERLKPN YAVSRNKHRS 60 SVDAEGSGIQ QGKKKRKRKP KVCKNKEEAE TQRMTHIAVE RNRRKQMNEH LAVLRSLMPE 120 SYVQRGDQAS IVGGAVEFVK ELEHLLSTLE AKKLESLEKE MQEENEDSVR RKLFSSVSSG 180 ASFSQLLMHS TDQNSSKFTS KSRASSAEIE VTLIETHANL RILSRRSHRQ LLKLIAGLQA 240 LRLTILHLNL THFHPLVLYS ISLKVEEGCQ LRSVDDIAAA AHHMVRIIEE EEGVLLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	79	KKKRKRK
2	74	79	KKRKRK
3	93	104	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	4e-58	bHLH family protein