PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714543.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 398aa MW: 44855.1 Da PI: 8.2216

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.8	5.1e-25	74	118	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_022714543.1 74 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEA 118 79****************************************986 PP
2	QLQ	59.5	9.6e-21	9	43	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l++Ky+++++P+PpeL+ ++ XP_022714543.1 9 PFTPSQWQELEHQALIFKYMVSGVPIPPELIYSVK 43 9*****************************87665 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MISARNRCPF TPSQWQELEH QALIFKYMVS GVPIPPELIY SVKRSLDSSL ASRVFPHQAI 60 GWGCFQVGFG RKADPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN RSRKPVEADS 120 TTAICTLPPP TSSILSPSFS SINRNLSMST SRNSSLSSIS FSFSPLSSSP IAPEIYSHHN 180 PNQTAHKNPF LYSHSPTSTR PPASGLSFQN ETSPHHFLDS GTGISYSQAD KDYRYVHGTR 240 EGVDERSFFP EASGSVRVVP DLYQPLTVSS YKSYPQSEYQ GFDDSGSKQL QQEQDQQHCF 300 VLGTDIKSAR PIKFEKGDET QKPVHQFFGD WPPRNTDPWL DLASNSGGHS GNSISLTYTI 360 YFHIVEVSIM DLCILDKKHL FWWDNSLALE IVARTALF

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MISARNRCPF TPSQWQELEH QALIFKYMVS GVPIPPELIY SVKRSLDSSL ASRVFPHQAI  60
GWGCFQVGFG RKADPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN RSRKPVEADS  120
TTAICTLPPP TSSILSPSFS SINRNLSMST SRNSSLSSIS FSFSPLSSSP IAPEIYSHHN  180
PNQTAHKNPF LYSHSPTSTR PPASGLSFQN ETSPHHFLDS GTGISYSQAD KDYRYVHGTR  240
EGVDERSFFP EASGSVRVVP DLYQPLTVSS YKSYPQSEYQ GFDDSGSKQL QQEQDQQHCF  300
VLGTDIKSAR PIKFEKGDET QKPVHQFFGD WPPRNTDPWL DLASNSGGHS GNSISLTYTI  360
YFHIVEVSIM DLCILDKKHL FWWDNSLALE IVARTALF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-66	GRF family protein