PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022714813.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARR-B
Protein Properties Length: 730aa    MW: 79531.8 Da    PI: 5.0549
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022714813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.24.4e-24200252255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      +++Wt+ LH++F+ea++ + G ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  XP_022714813.1 200 GKVVWTNSLHNQFLEALRYI-GLEKAVPKKILEHMNVQGLTRENVASHLQKYRI 252
                     5899****************.********************************6 PP
2Myb_DNA-binding30.21.1e-09202251248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT  ++ ++++a +  G +   +k+I ++m+ +g+t++++ s++qky+
   XP_022714813.1 202 VVWTNSLHNQFLEALRYIGLEkaVPKKILEHMNvQGLTRENVASHLQKYR 251
                      68******************9****************************7 PP
3Response_reg81.82.1e-27101201109
                     EEEESSSHHHHHHHHHHHH...HTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
    Response_reg   1 vlivdDeplvrellrqale...kegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                     +l+vdD+ + + ++ ++l+    e++ +va+++++ +al +l+++  +Dl+++D+ mp+m+G+el ++i++e  k+p+i++++ ++e+ +l+ l 
  XP_022714813.1  10 ILVVDDDSTSLAIISSMLKqwrYEDI-SVATVKTPVDALSTLRAHPsIDLVVTDLHMPEMNGIELQRQINQEF-KVPVIIMSSDDKESVMLKSLA 102
                     89*****************5544566.788***************99**********************9999.9******************** PP

                     TTESEEEESS--HHHHHH CS
    Response_reg  92 aGakdflsKpfdpeelvk 109
                      Ga  f++Kp++p++l +
  XP_022714813.1 103 GGAVFFIVKPVNPDDLKN 120
                     ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    
MNSSLLKISI LVVDDDSTSL AIISSMLKQW RYEDISVATV KTPVDALSTL RAHPSIDLVV  60
TDLHMPEMNG IELQRQINQE FKVPVIIMSS DDKESVMLKS LAGGAVFFIV KPVNPDDLKN  120
VWQYTIAAKK GKSVFIEEIG SIEGESSSAG KLSKGQIIIS ESSVNDEKNN TKRRSKRKAS  180
RKDKDDQQEE EEIASSPRKG KVVWTNSLHN QFLEALRYIG LEKAVPKKIL EHMNVQGLTR  240
ENVASHLQKY RIFLKRVAER SCFSSKAFVE SVLKSSIASG HPLLLKTAQE YSRLQELKQM  300
RGLTSQAGYG RSPSAHNAAS LGSILFPNQN ASSSNSAQPQ GYGQYCLLGN QANKRQVSGK  360
TNPLYQGNSL GYANGSNLSL NGGLYGGLIN VPNGSMNGAN SMHTYQQQIQ ARPYFYTADS  420
SSQFRFGSPG LHSSSSTLGT GNIGSISTSY PTLNSSCTNN NTYAGIRLTT DGQLTGMGQT  480
RLNGGYGSMN GTYNQNMNFE AMGNQTFRFN SQGEFSSTVV DGAKQVSPTY TAANQQANTS  540
VLPGLGNLGV SDYNSDHPMN NDSNLDNISL SQQPGDSYPC DVLSESNNYQ FLNEQQVGGD  600
SVQQKPEFAS SSLFPEIYPT LDEIVGSEFL SLEETAPWCE QALGQVQSGN KEFMNTSVGG  660
GEYTSDESYP TNVNQNTNQQ QSGEEHLADS ELSSVFRVDN APTSGDDSSD NQNWGDDFVD  720
SMFGFGPHFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07210.11e-53ARR-B family protein