PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714817.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 316aa MW: 36499.5 Da PI: 8.3055

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00017	20	42	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cg + s ks+ ++Hi tH XP_022714817.1 20 YVCKYCGICRSKKSLITSHILTH 42 9*********************6 PP
2	zf-C2H2	19.3	3.1e-06	62	83	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H XP_022714817.1 62 TCEQCGVTFKKPAHLKQHLQSH 83 6*******************99 PP
3	zf-C2H2	16.5	2.4e-05	89	113	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C dC s++rk++L+rH+ H XP_022714817.1 89 FVCLvdDCRASYRRKDHLNRHLLQH 113 899999***************9887 PP
4	zf-C2H2	16	3.5e-05	118	143	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ Fs + n+krH + H XP_022714817.1 118 FKCPieNCNREFSIQGNMKRHVKEfH 143 89********************9988 PP
5	zf-C2H2	17.5	1.1e-05	158	182	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H XP_022714817.1 158 HVCQevGCGKVFKFASKLRKHEDSH 182 789999***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MDEEKGERAE APIFKDRRRY VCKYCGICRS KKSLITSHIL THHPEEIDDG GKEEEEISSL 60 NTCEQCGVTF KKPAHLKQHL QSHSLERSFV CLVDDCRASY RRKDHLNRHL LQHQGKLFKC 120 PIENCNREFS IQGNMKRHVK EFHDEESTSP DVGSQKQHVC QEVGCGKVFK FASKLRKHED 180 SHVKLDSVEA FCSEPSCMKY FTNEQCLKVH VQSCHQYITC QICGKKQLKK NIKRHLRSHE 240 SGVASERFKC DFEGCLHTFL TGNFIESDEQ FQSRPRGGRK RTWPTVETLI RKRVTPPQMD 300 ATMDATMDPG HTLGCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-114	C2H2 family protein