PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714859.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 1005aa MW: 112645 Da PI: 7.7364

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.2	2e-08	223	284	20	82
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 ++ r+k ++ + ++v++++ ++g++r +k+ kw+n+ ++++k+ e+e+++++e++ +yf XP_022714859.1 223 QSTRSKTRADKDRAVAEFLNKHGISRDAKTAGTKWDNMLGEFRKVYEWERGGEKEQV-GKSYF 284 4567888899999**************************************976665.44455 PP

Sequence ? help Back to Top
Protein Sequence Length: 1005 aa Download sequence
MGDNKGDTTK KQTPQQTHQQ QQLSSSPKEA LEESSESGQK HLQQLSAVVE TATGPPFISA 60 PLYVPTGTTS PYEQQYESVN PKRPRYNSGQ WKLLPSPSSL QSQTQMAIIT SESSPSPTTN 120 PINPQSQVHT TAASSSDTAS SPPSSPLPST TSGQETNKPE GEQFHNQFRK GKYVSPIWKP 180 NEMLWLARAW RIQYQGGSDA SGSSSRIVHQ ETGHVTGSDA AVQSTRSKTR ADKDRAVAEF 240 LNKHGISRDA KTAGTKWDNM LGEFRKVYEW ERGGEKEQVG KSYFRLSPYE RKLHRLPASF 300 DEEVFEELSQ FMGPRMRTSQ SRGASAIASS DDARPILSGS RALLPPPPFK EDELPLFVLN 360 IAKPRRWCYF MLSPLVRTKQ LVTTSGGDTF FHGTRGSLLG FDTSLDVGVA LPYSSSSKEL 420 RRIGKIRMTW EESVSLWAEE GEHHRGRVRL QGSSFLNADE LTFFDDAVVA CTMEAFEDGP 480 LKGFTIDRFV NGQQVKVFGR RNSSAASASS GTNIFVNVSY SGTVQKFQSK TMPPLEFQDP 540 TDYYVGCLRV PPTTLPSLFE LSWHLQEPLP EEYRFPLRRD VYRDLPPGKE ALFTISNELL 600 DCRAILYDIL SPIIRTNPSL SAATATGRDS YIGLWDDCIN RVVSKFCSVE MVIIRKPSSS 660 LTEPLQDQWP NVTGFVRNFC LWRGEETDQL REGQLDPPSS IVEKLLWTYM DLPYLLGYYA 720 VGYMVTLCAL SRSQDRIIRT DLYSVDLSSP SERLKALVPC CRIAGLLPLL ADRCFNNVNN 780 VGSYKQFLFS DFERIDLGNG SKMEMTPNTV IRSFSSKKKW AAVKEIYNIL DHRIPHSEFI 840 CRASEKDLTL VFKPRGCKSR PINCDQLVEA LKYVTKALVA LHDLCFMHRD LCWDKVPRRS 900 DRENEWFVCG FEEAVVAPQI NPHPAVTAEA GGRHAPEMGR GLHGVKVDVW GVGHLVNTCG 960 LTNMPKMLRE LQNRCMDQNP EQRPTAADCY HHLLQVQSAS SSAPY

Sequence ? help Back to Top

Protein Sequence Length: 1005 aa Download sequence

MGDNKGDTTK KQTPQQTHQQ QQLSSSPKEA LEESSESGQK HLQQLSAVVE TATGPPFISA  60
PLYVPTGTTS PYEQQYESVN PKRPRYNSGQ WKLLPSPSSL QSQTQMAIIT SESSPSPTTN  120
PINPQSQVHT TAASSSDTAS SPPSSPLPST TSGQETNKPE GEQFHNQFRK GKYVSPIWKP  180
NEMLWLARAW RIQYQGGSDA SGSSSRIVHQ ETGHVTGSDA AVQSTRSKTR ADKDRAVAEF  240
LNKHGISRDA KTAGTKWDNM LGEFRKVYEW ERGGEKEQVG KSYFRLSPYE RKLHRLPASF  300
DEEVFEELSQ FMGPRMRTSQ SRGASAIASS DDARPILSGS RALLPPPPFK EDELPLFVLN  360
IAKPRRWCYF MLSPLVRTKQ LVTTSGGDTF FHGTRGSLLG FDTSLDVGVA LPYSSSSKEL  420
RRIGKIRMTW EESVSLWAEE GEHHRGRVRL QGSSFLNADE LTFFDDAVVA CTMEAFEDGP  480
LKGFTIDRFV NGQQVKVFGR RNSSAASASS GTNIFVNVSY SGTVQKFQSK TMPPLEFQDP  540
TDYYVGCLRV PPTTLPSLFE LSWHLQEPLP EEYRFPLRRD VYRDLPPGKE ALFTISNELL  600
DCRAILYDIL SPIIRTNPSL SAATATGRDS YIGLWDDCIN RVVSKFCSVE MVIIRKPSSS  660
LTEPLQDQWP NVTGFVRNFC LWRGEETDQL REGQLDPPSS IVEKLLWTYM DLPYLLGYYA  720
VGYMVTLCAL SRSQDRIIRT DLYSVDLSSP SERLKALVPC CRIAGLLPLL ADRCFNNVNN  780
VGSYKQFLFS DFERIDLGNG SKMEMTPNTV IRSFSSKKKW AAVKEIYNIL DHRIPHSEFI  840
CRASEKDLTL VFKPRGCKSR PINCDQLVEA LKYVTKALVA LHDLCFMHRD LCWDKVPRRS  900
DRENEWFVCG FEEAVVAPQI NPHPAVTAEA GGRHAPEMGR GLHGVKVDVW GVGHLVNTCG  960
LTNMPKMLRE LQNRCMDQNP EQRPTAADCY HHLLQVQSAS SSAPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	6e-07	Trihelix family protein