PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022714992.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 752aa    MW: 83421.4 Da    PI: 6.397
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022714992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.22.1e-2197152156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r+k +++t eq++e+e+lF+++++p++++r++L+k+lgL  rqVk+WFqNrR++ k
  XP_022714992.1  97 RKKYHRHTGEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 152
                     7999************************************************9877 PP
2START228.81.6e-712674902206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     + ++a++el k+a+a+ep+Wv+s+    e++n+de++++f+ +++      +s+ea+r++gvv+ +l++lv++++d++ qW+e+++    ka+t+
  XP_022714992.1 267 IVNQAMEELKKMATAGEPLWVRSVetrrEILNYDEYVKEFSVENSsngrpkRSIEASRETGVVFVDLPRLVQSFMDVN-QWKEMFPciisKAATV 360
                     56789***********************************8888899*******************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vi++g      g +qlm+aelq+l+plvp R+++fvRy++ql+a++w+ivdvS+d  +++  ++s+v+ +++pSg++ie+ksngh+kvtwveh 
  XP_022714992.1 361 DVICNGeapnrnGSVQLMFAELQMLTPLVPtREVYFVRYCKQLSAEQWAIVDVSIDKVEENI-DASLVKFRKRPSGCIIEDKSNGHCKVTWVEHL 454
                     ************************************************************98.9******************************* PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++ +h ++r +v+sgla+ga++w+atlq qce+
  XP_022714992.1 455 ECQKSAVHTMYRTVVSSGLAFGARHWMATLQLQCER 490
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    
MGVDMSNPPT KDFFASPALS LSLAGIFREA GAAAAAAASV EVEEGDEGSG GGSGNKRENT  60
VEISSENSGP ARSRSEDELL DHDDDEDDDD KTKKKKRKKY HRHTGEQIRE MEALFKESPH  120
PDEKQRQQLS KQLGLAPRQV KFWFQNRRTQ IKAIQERHEN SLLKQELEKL QEENNAMRKT  180
INKACCPNCG MATTSKDDSM TTEEQQLRIE NAKLKAEVEK LRTVIGKYPP GTASTSSCSA  240
GNDQENRSSL DFYSGIFGLE KSRIMEIVNQ AMEELKKMAT AGEPLWVRSV ETRREILNYD  300
EYVKEFSVEN SSNGRPKRSI EASRETGVVF VDLPRLVQSF MDVNQWKEMF PCIISKAATV  360
DVICNGEAPN RNGSVQLMFA ELQMLTPLVP TREVYFVRYC KQLSAEQWAI VDVSIDKVEE  420
NIDASLVKFR KRPSGCIIED KSNGHCKVTW VEHLECQKSA VHTMYRTVVS SGLAFGARHW  480
MATLQLQCER LVFFMATNVP TKDSNGVATL AGRKSILKLA QRMTRSFCYA IGASSYHTWN  540
KVSGKTGEDI RVSSRKNLND PGEPLGVIVC AVSSVWLPVS PNLLFDFLRD EARRNEWDIM  600
SNGGPVQSIA NLAKGQHRGN AVTIQTMKSK ENSIWVLQDS CTNAFESMVV FAPVDITAMQ  660
SVITGCDSSN MAILPSGFSI LPDGLESRPL VITSKHEKSN DTEGGSLLTI AFQILTNSSP  720
TAKLTKESVE SVNTLISCTV GNIKTSLQCE DG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19398KKKKRK
29399KKKKRKK
39599KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein