PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715160.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 253aa MW: 29131.4 Da PI: 5.3283

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	131.5	3.5e-41	14	113	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC++dC+lapyfp++++++f+n+hklFG+sn+ k++k+l++ e+++am+++v++++ara+dPv G++++i++lq+q+e ++ael+ XP_022715160.1 14 ACAACKYQRRKCTPDCILAPYFPHDRQRQFQNAHKLFGVSNINKIIKNLNPPEKDIAMRTIVFQSDARASDPVGGCYRIIQELQRQIEYSQAELD 108 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_022715160.1 109 LVFHQ 113 98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MSISRSGSNG TTQACAACKY QRRKCTPDCI LAPYFPHDRQ RQFQNAHKLF GVSNINKIIK 60 NLNPPEKDIA MRTIVFQSDA RASDPVGGCY RIIQELQRQI EYSQAELDLV FHQLAICRAQ 120 AVQQHQQQTS HLQMQEPGCN STLGCEMVDP DPLNSYNSNY YYAQEPHEEQ FAMNDNNQHH 180 LQENYDRSWG IQESTTALSS LNIKQDFIKE CDDNHDEVKP ELGIPYERHE IKFETEELVE 240 RTFVPSTQLV MSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	3e-61	LBD family protein