PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715219.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YA

Protein Properties

Length: 352aa MW: 39021.4 Da PI: 7.1004

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	103.1	2.5e-32	193	249	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep+YVNaKQyq+Il+RRq Rakle+++kl +k rkpylheSRh hAl+R+Rg+gGrF XP_022715219.1 193 DEPIYVNAKQYQAILRRRQYRAKLEAQNKL-IKVRKPYLHESRHLHALKRARGNGGRF 249 79**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MQNLHTRDSA VSSHSTCTYL VGCSSWDNST ESHIQQSSMS ESLSLKMGVL PQQFHNTKQL 60 NFQFQDQNSS STQSTGQSYP EVASAGDSNL RWQSLISASS GGNETHGKLV GGHVKLVSSM 120 GTQEYIFPPS QYIFPPSQVD YSKSIAHIPL HYAEPYFGGV VAAAYGPQAV IHHPHMMTVL 180 PARVPLPLEL TEDEPIYVNA KQYQAILRRR QYRAKLEAQN KLIKVRKPYL HESRHLHALK 240 RARGNGGRFL NTEEPQESKC IPTSHGQDMT RYPQLHLSAN VTKSEVHQLE NYNDAVSATS 300 CSDVSSASNS DEMFQQPDFR FPGYPSHIGG TMPGHADDMD GGENVHHRSG LC

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MQNLHTRDSA VSSHSTCTYL VGCSSWDNST ESHIQQSSMS ESLSLKMGVL PQQFHNTKQL  60
NFQFQDQNSS STQSTGQSYP EVASAGDSNL RWQSLISASS GGNETHGKLV GGHVKLVSSM  120
GTQEYIFPPS QYIFPPSQVD YSKSIAHIPL HYAEPYFGGV VAAAYGPQAV IHHPHMMTVL  180
PARVPLPLEL TEDEPIYVNA KQYQAILRRR QYRAKLEAQN KLIKVRKPYL HESRHLHALK  240
RARGNGGRFL NTEEPQESKC IPTSHGQDMT RYPQLHLSAN VTKSEVHQLE NYNDAVSATS  300
CSDVSSASNS DEMFQQPDFR FPGYPSHIGG TMPGHADDMD GGENVHHRSG LC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72830.1	2e-73	NF-YA family protein