PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715245.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 512aa MW: 56325.7 Da PI: 9.8421

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.6	3.3e-09	398	446	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_022715245.1 398 AWTLSEVMKLVEGVSKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 446 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MPQLESSEGL SQSENTEADT EKLSARLEET VPTRAQGLND DHVTQSGNVG ECSKPLDGPM 60 EGGSSTSAGY ISSKPDFSKL KGEICLDNLS IKELHEVFKA TFGRDTTVKD KQWLKRRIAM 120 GLTNSCDVST TTFVIKDNKL VKEGKEDSSN NVNLPTGKEY PAASIEYHVD LLNSHGSQID 180 ELQTTSGTRL GNNGVENNYA SEDLAADQRA AKRVRKPTKR YIEELSEAES KEYSGRFITS 240 TRNIGIRHLT SKSHVRPARN LSLEGRTVIM RLDSLGGSGI RVPCVCRVRR SRPRKNVMAL 300 LKFHPSGMGM TATFVRKDLD IRSSLIDNGS VNKLLEVKSS PEETPQQFVT ESKKEKPSAE 360 LGRNMGLKYV DPSGYTSDDN VATVPTAKGG TRRKHHRAWT LSEVMKLVEG VSKYGAGRWS 420 EIKRLAFASY SYRTSVDLKD KWRNLLKASF ALTPADKGVN SRKHPSMPIP APILLRVREL 480 AEMQAQVPAP NPSASKLAAC GGSVNEPRLG YL

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MPQLESSEGL SQSENTEADT EKLSARLEET VPTRAQGLND DHVTQSGNVG ECSKPLDGPM  60
EGGSSTSAGY ISSKPDFSKL KGEICLDNLS IKELHEVFKA TFGRDTTVKD KQWLKRRIAM  120
GLTNSCDVST TTFVIKDNKL VKEGKEDSSN NVNLPTGKEY PAASIEYHVD LLNSHGSQID  180
ELQTTSGTRL GNNGVENNYA SEDLAADQRA AKRVRKPTKR YIEELSEAES KEYSGRFITS  240
TRNIGIRHLT SKSHVRPARN LSLEGRTVIM RLDSLGGSGI RVPCVCRVRR SRPRKNVMAL  300
LKFHPSGMGM TATFVRKDLD IRSSLIDNGS VNKLLEVKSS PEETPQQFVT ESKKEKPSAE  360
LGRNMGLKYV DPSGYTSDDN VATVPTAKGG TRRKHHRAWT LSEVMKLVEG VSKYGAGRWS  420
EIKRLAFASY SYRTSVDLKD KWRNLLKASF ALTPADKGVN SRKHPSMPIP APILLRVREL  480
AEMQAQVPAP NPSASKLAAC GGSVNEPRLG YL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	295	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-118	MYB_related family protein